SDPsite: prediction of protein active and specific recognition sites from sequence and structure

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##FAMILY##

This family contains a protein with resolved 3D structure: Q9X113_THEMA/48-121, pdb ID: 1o4t. SDPsite predicts following important positions (numbering corresponds to 1o4t):

  • SDPs:

    96T

  • CPs:

    102H, 75G

  • Best cluster:

    96T, 102H

  • Second best cluster:

  • Mapping predictions onto structure of 1o4t:

  • Associated grouping:

    • Group 1

      • Q9L4X8_9ACTO/42-112
      • Q8KSW5_9ACTO/43-113
      • Q9FD20_STRCU/41-112
      • Q89IS8_BRAJA/28-99
      • Q98J91_RHILO/37-110
      • Q828V4_STRAW/39-109
      • Q9HNB4_HALN1/72-141
      • Q97C89_THEVO/43-110
      • Q972Z0_SULTO/41-109
      • Q97XY5_SULSO/42-110
      • O57816_PYRHO/38-108
      • Q9X1H0_THEMA/39-108
    • Group 2

      • Q833Y1_ENTFA/2-75
      • Q87D98_XYLFT/66-139
      • Q98K58_RHILO/41-114
    • Group 3

      • Q81F74_BACCR/105-176
      • Q81QL0_BACAN/109-181
      • Q98HA7_RHILO/125-197
      • Q988N1_RHILO/114-188
      • Q9K8U3_BACHD/110-182
      • Q8F282_LEPIN/125-197
      • Q8Z790_SALTI/124-195
      • Q877U0_BRAJA/122-192
      • Q92ZA9_RHIME/80-151
      • Q83VZ0_STRCJ/113-184
      • Q89FI5_BRAJA/129-200
      • Q92V63_RHIME/200-271
      • Q9HVS2_PSEAE/107-176
      • Q88I76_PSEPK/104-175
      • Q8Y085_RALSO/103-174
      • O26755_METTH/116-186
      • Q8PUE1_METMA/117-188
      • Q8A1B0_BACTN/111-183
      • Q8TLV9_METAC/111-183
      • Q826Y4_STRAW/124-195
      • Q93IV8_STRCO/124-195
      • Q87NU0_VIBPA/109-180
      • Q8X7G4_ECO57/110-180
      • Q88KV8_PSEPK/111-183
      • Q9I601_PSEAE/112-183
      • Q8RHS0_FUSNN/107-179
      • Q89T27_BRAJA/147-219
      • Q98KX2_RHILO/106-175
      • Q9HUH8_PSEAE/124-194
      • Q82ML6_STRAW/113-183
      • Q8EHF7_SHEON/106-177
      • Q881J2_PSESM/105-177
      • Q9WZC4_THEMA/104-174
      • Q986F2_RHILO/146-216
      • Q985H7_RHILO/130-200
      • O86784_STRCO/118-185
      • Q88BB2_PSESM/123-194
      • Q9HTQ3_PSEAE/106-177
      • Q8FVB9_BRUSU/106-177
      • Q8XIZ6_CLOPE/104-174
      • Q97KS5_CLOAB/104-174
      • Q826P4_STRAW/119-190
      • Q9X9V0_STRCO/105-178
      • Q89T30_BRAJA/106-177
      • Q8UAP5_AGRT5/106-177
    • Group 4

      • Q89G19_BRAJA/78-150
      • Q9I6M0_PSEAE/46-118
      • Q89EU4_BRAJA/69-143
      • Q89CW8_BRAJA/75-149
      • Q92TT8_RHIME/48-122
      • Q89M28_BRAJA/51-125
      • Q8U7Z7_AGRT5/49-123
      • Q98LL3_RHILO/49-123
    • Group 5

      • P73929_SYNY3/58-128
      • Q8KLF9_RHIET/54-125
      • Q98L98_RHILO/59-130
    • Group 6

      • Q97XD3_SULSO/105-172
      • Q8ZPR7_SALTY/25-99
      • Q89FI2_BRAJA/39-109
    • Group 7

      • Q92T91_RHIME/31-98
      • Q98EC6_RHILO/34-103
      • Q89IS0_BRAJA/32-98
      • Q84AM8_STRMB/51-121
      • Q88L64_PSEPK/40-106
      • Q9I0Z2_PSEAE/36-102
      • Q81BB7_BACCR/11-77
      • Q8PR38_XANAC/35-101
    • Group 8

      • Q938D6_MYCSM/43-116
      • Q9KYP9_STRCO/79-150
      • Q9FC59_STRCO/56-127
      • Q89Y26_BRAJA/38-106
      • Q82W20_NITEU/35-101
      • Q8NRZ1_CORGL/234-312
    • Group 9

      • Q898K6_CLOTE/42-109
      • Q8RE25_FUSNN/42-111
      • Q82FI2_STRAW/32-100
      • Q8TX08_METKA/28-91
    • Group 10

      • Q8ZUG4_PYRAE/25-92
      • Q87K19_VIBPA/31-98
      • Q98EW3_RHILO/41-108
      • Q92V11_RHIME/36-103
    • Group 11

      • Q9X113_THEMA/48-121
      • Q8PQZ8_XANAC/288-357
      • Q8RFX7_FUSNN/60-131
    • Group 12

      • Q8TL54_METAC/227-296
      • Q8EBA8_SHEON/125-197
      • Q881C9_PSESM/39-108
      • Q8XQ54_RALSO/38-110
    • Group 13

      • Q8FLK8_COREF/169-242
      • Q9WXH3_ALCFA/98-172
      • O24721_9ACTO/102-176
      • Q83T65_SALTI/94-167
      • Q9I112_PSEAE/92-169
      • Q9KBC4_BACHD/94-167
      • Q9S3U6_PSEAC/95-168
      • Q89PR8_BRAJA/99-173
      • Q89Y45_BRAJA/92-165
      • O86921_9SPHN/95-168
      • O86041_9RALS/105-178
      • Q9KBC6_BACHD/100-173
    • Group 14

      • Q9HMK9_HALN1/43-115
      • Q81C18_BACCR/30-100
      • Q8Z2X2_SALTI/2-65
      • Q884L6_PSESM/49-122
      • Q92QU1_RHIME/44-118
      • Q97J98_CLOAB/41-114
      • Q8YKH8_ANASP/40-113
      • Q8GAT6_KLEPN/46-119
      • Q9KMR2_VIBCH/46-119
      • Q89VB3_BRAJA/53-126
      • Q9ABF4_CAUCR/45-118
      • Q8PQS9_XANAC/52-125
      • Q8YWR5_ANASP/44-117
      • Q89N34_BRAJA/45-118
      • Q98I83_RHILO/132-205
    • Group 15

      • Q9ZBH8_STRCO/39-109
      • Q8XYD9_RALSO/39-108
      • Q988H6_RHILO/37-107
      • Q8DY39_STRA5/31-102
      • Q8PZF7_METMA/34-105
      • Q8ET89_OCEIH/203-279
      • Q8KJS2_LACPL/43-120
      • Q893C8_CLOTE/91-167
      • Q9K9C9_BACHD/193-269