SDPsite: prediction of protein active and specific recognition sites from sequence and structure

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##FAMILY##

This family contains a protein with resolved 3D structure: Q8P6W3_XANCP/2-73, pdb ID: 1ttz. SDPsite predicts following important positions (numbering corresponds to 1ttz):

  • SDPs:

    49P

  • CPs:

    11C, 14C, 44Y, 49P, 34I, 33F, 68L

  • Best cluster:

    11C, 14C, 33F, 34I, 44Y, 49P

  • Second best cluster:

  • Mapping predictions onto structure of 1ttz:

  • Associated grouping:

    • Group 1

      • MESC_LEUME/42-123
      • Q6TVE8_9POXV/12-119
      • GLR2_VACCA/4-112
      • Q98227_MCV1/4-111
      • Q8V3P4_SWPV/4-112
      • Q6VZP3_CNPV/4-114
      • Q70H77_FOWPV/4-114
      • Q6TUW0_YMTV/4-112
      • Q9Q8P8_9POXV/4-112
    • Group 2

      • Q8KFT5_CHLTE/4-78
      • Q8ENP1_OCEIH/5-78
      • Q81X72_BACAN/2-76
      • Q9K711_BACHD/3-77
      • Q8T427_DROME/313-388
      • Q9CWB7_MOUSE/31-105
      • Q82E79_STRAW/21-95
      • Q05530_YEAST/22-109
      • Q75F14_ASHGO/51-136
      • Q7NFN0_GLOVI/4-80
      • Q82SJ4_NITEU/9-85
      • Q83MP9_TROWT/40-129
      • Q8Y0I5_RALSO/3-85
      • Q8P6W3_XANCP/2-73
      • Q72LP3_THET2/2-72
      • Q9RY93_DEIRA/6-76
      • Q73SS2_MYCPA/9-88
      • Q7V2Q9_PROMP/2-91
      • Q7NWC8_CHRVO/2-76
      • Q9JV75_NEIMA/2-76
      • Y520_MYCBO/5-84
      • Q8YWE9_ANASP/2-83
      • Q6ZGK5_ORYSA/47-135
      • Q93WH0_ARATH/34-122
      • Q7U5L1_SYNPX/3-83
      • Q883M0_PSESM/20-95
      • Q88L28_PSEPK/4-78
      • Q8EFW3_SHEON/10-80
      • Q6NJK2_CORDI/5-79
      • P74056_SYNY3/9-88
      • Q8DLR7_SYNEL/3-80
      • Q7VDG5_PROMA/5-93
      • Q7V8U7_PROMM/5-93
      • Q8FSG1_COREF/515-589
      • Q6M7U8_CORGL/4-78
      • Q6LR99_PHOPR/2-102
      • Q7MKX0_VIBVY/13-84
      • Q87PC1_VIBPA/1-72
      • Q9KRZ6_VIBCH/1-72