SDPsite: prediction of protein active and specific recognition sites from sequence and structure

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##FAMILY##

This family contains a protein with resolved 3D structure: UBE4A_HUMAN/994-1068, pdb ID: 1wgm. SDPsite predicts following important positions (numbering corresponds to 1wgm):

  • SDPs:

    100.5594839377011191, 100.5575793850780695, 100.5737604414610632, 100.5793449659355009, 100.5645908389040313, 100.5501137975490228, 100.5714910300943581

  • CPs:

  • Best cluster:

  • Second best cluster:

  • Mapping predictions onto structure of 1wgm:

  • Associated grouping:

    • Group 1

      • Q9SRS9_ARATH/199-273
      • Q9BMU2_CAEEL/184-258
      • O60526_HUMAN/226-300
      • Q9XYW6_DROME/213-286
    • Group 2

      • Q9VK44_DROME/1140-1213
      • UBE4B_HUMAN/1227-1300
      • UBE4_CAEEL/905-978
      • O44007_DICDI/1015-1089
      • Q9LF41_ARATH/940-1014
      • UFD2_SCHPO/930-1004
      • UFD2_YEAST/880-954
      • UBE4A_HUMAN/994-1068
      • Q9U4F8_DROME/914-988