SDPsite - PF04452

SDPsite: prediction of protein active and specific recognition sites from sequence and structure

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##FAMILY##

This family contains a protein with resolved 3D structure: Y303_HAEIN/18-238, pdb ID: 1nxz. SDPsite predicts following important positions (numbering corresponds to 1nxz):

SDPs:

43F, 92M, 173P, 139C, 84Q, 90E, 143G, 50Y, 226E, 137A, 172H, 32L, 44D, 94F, 142C, 91R, 200L, 237Q, 24A, 171L, 98K, 110L, 108T, 174R, 131W, 138A, 225T, 87S, 85V, 145N, 231A, 88R, 28V
CPs:

195G, 103G, 27H, 199G, 197E, 141Q, 204E, 196S, 198G
Best cluster:

84Q, 85V, 87S, 88R, 90E, 91R, 225T, 226E
Second best cluster:

137A, 138A, 139C, 142C, 143G
Mapping predictions onto structure of 1nxz:

Associated grouping:

Group 1

```
Q7VBR8_PROMA/24-246
```
```
Q7V223_PROMP/22-248
```
```
Q7V7G0_PROMM/24-244
```
```
Q7U730_SYNPX/24-238
```

Group 2

```
Q7PAV9_RICSI/18-235
```
```
Q73FW1_WOLPM/18-226
```
```
Q6G0I7_BARQU/22-239
```
```
Q9A2Z1_CAUCR/16-232
```
```
Q9RH08_ZYMMO/27-242
```
```
Q7D102_AGRT5/22-239
```
```
Q92RS8_RHIME/22-239
```
```
Q8FVR3_BRUSU/16-233
```
```
Q987U8_RHILO/16-233
```
```
Q6NAN3_RHOPA/23-243
```
```
Q89DB6_BRAJA/24-242
```

Group 3

```
Q7ND55_GLOVI/19-229
```
```
Q72K73_THET2/18-224
```
```
Q9RU73_DEIRA/24-239
```
```
Y722_SYNY3/80-299
```
```
Q8DI45_SYNEL/47-258
```
```
Q8YX66_ANASP/19-231
```

Group 4

```
Q82WB5_NITEU/17-247
```
```
Q7VZC1_BORPE/18-240
```
```
Q83AE1_COXBU/18-233
```
```
Q6FA41_ACIAD/16-235
```
```
Q9F9G9_9GAMM/17-236
```
```
Q8XVR6_RALSO/18-244
```
```
Q87EY9_XYLFT/18-239
```
```
Q8P6T0_XANCP/18-239
```
```
Q7P147_CHRVO/16-235
```
```
Q9JW64_NEIMA/16-235
```
```
Q87V65_PSESM/19-234
```
```
Q9I694_PSEAE/19-234
```
```
Y410_BUCAI/27-247
```
```
Y395_BUCAP/20-240
```
```
Q6LMM5_PHOPR/2-219
```
```
Q87LK2_VIBPA/18-237
```
```
Q8EIK7_SHEON/18-237
```
```
Y303_HAEIN/18-238
```
```
Q7VKS8_HAEDU/18-238
```
```
Q8ZHG4_YERPE/18-237
```
```
Q6D078_ERWCT/19-238
```
```
YGGJ_ECOLI/18-237
```

Group 5

```
Q6A996_PROAC/19-238
```
```
Q8G5Y7_BIFLO/28-259
```
```
Q83GJ2_TROWT/19-230
```
```
Q6AEC1_LEIXX/18-236
```
```
Q82BY2_STRAW/19-243
```
```
Q9RDD9_STRCO/21-243
```
```
Q6NG15_CORDI/26-247
```
```
Y2393_MYCBO/18-242
```
```
Q8FNF6_COREF/18-236
```
```
Q8NNB5_CORGL/18-236
```
```
Q73XZ7_MYCPA/18-242
```
```
Q9CCN1_MYCLE/18-246
```

Group 6

```
Q71ZK0_LISMF/17-245
```
```
YQEU_BACSU/19-247
```
```
Q9KD69_BACHD/16-244
```
```
Q6G8Z0_STAAS/16-244
```
```
Q8CSC8_STAEP/19-247
```
```
Q833H7_ENTFA/16-244
```
```
Q88VQ0_LACPL/18-245
```
```
Q9CJ96_LACLA/18-245
```
```
Q8DNP5_STRR6/18-245
```
```
Q8DS03_STRMU/14-241
```
```
Q8K5R0_STRP3/14-241
```
```
Q8DX86_STRA5/14-241
```

Group 7

```
Y181_MYCHY/14-226
```
```
Q6KI62_MYCMO/14-223
```
```
Q98Q27_MYCPU/14-222
```

Group 8

```
Q9ZIA2_CLOAB/16-241
```
```
Q892R3_CLOTE/16-241
```
```
Q8XIT7_CLOPE/16-241
```

Group 9

```
Q7MQN6_WOLSU/14-220
```
```
Q7VHH3_HELHP/14-232
```
```
Y374_HELPY/14-226
```
```
Q9PIX1_CAMJE/14-218
```

Group 10

```
Y062_BORBU/15-233
```
```
Q72R98_LEPIC/18-253
```
```
Y032_TREPA/18-242
```
```
Q73J56_TREDE/35-272
```
```
Q6AMJ0_DESPS/17-250
```
```
Q7RMG7_PLAYO/19-251
```
```
Q6LF88_PLAF7/19-252
```
```
Q7U7K3_SYNPX/18-237
```
```
Q6F738_ACIAD/16-235
```
```
Q9HUB2_PSEAE/17-235
```
```
Q87UY4_PSESM/17-235
```
```
Q88D10_PSEPK/17-235
```