SDPsite: prediction of protein active and specific recognition sites from sequence and structure

Home & Submit job
Algorithm & 
Format requirements
Contact us
Gallery of examples


This family contains a protein with resolved 3D structure: PHP_ECOLI/1-292, pdb ID: 1bf6. SDPsite predicts following important positions (numbering corresponds to 1bf6):

  • SDPs:

  • CPs:

    12H, 14H, 158H, 186H, 154P, 267P, 287P, 7G, 47G, 82G, 112G, 121G, 152G, 176G, 203G, 209D, 233G, 243D, 273G

  • Best cluster:

    12H, 14H, 158H, 186H, 209D, 243D

  • Second best cluster:

    7G, 47G, 121G, 152G, 154P, 287P

  • Mapping predictions onto structure of 1bf6:

  • Associated grouping: