SDPsite - PF01985

SDPsite: prediction of protein active and specific recognition sites from sequence and structure

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##FAMILY##

This family contains a protein with resolved 3D structure: Y1333_HAEIN/4-87, pdb ID: 1jo0. SDPsite predicts following important positions (numbering corresponds to 1jo0):

SDPs:

42L, 73A, 41A, 31T, 28N, 16A, 79I, 23V, 37E, 77Q, 43N, 39E, 60K, 27G, 72K, 22V, 19L, 84V
CPs:

29G, 86Y, 26G, 49K, 50V, 76V, 67I, 46E, 48I, 25L, 84V, 12L, 35L, 38I
Best cluster:

12L, 16A, 39E, 43N, 46E, 48I, 50V, 67I, 73A, 84V, 86Y
Second best cluster:

22V, 23V, 25L, 26G, 27G, 28N, 29G, 31T, 37E, 38I, 41A, 42L, 49K, 76V, 77Q
Mapping predictions onto structure of 1jo0:

Associated grouping:

Group 1

```
Q9SJU2_ARATH/15-101
```
```
Q9LDA9_ARATH/203-286
```
```
Q9SL79_ARATH/361-444
```
```
Q8TU81_METAC/1-86
```
```
Q8TUY0_METKA/7-92
```
```
Q9P9D4_9EURY/1-86
```
```
Q9HRP6_HALN1/1-80
```
```
Y652_METJA/13-97
```
```
Q8REA3_FUSNN/1-84
```
```
Q8XZ80_RALSO/6-89
```
```
Q9JV39_NEIMA/6-89
```
```
O59043_PYRHO/6-93
```
```
Q8G839_BIFLO/16-99
```
```
Q8DNQ6_STRR6/3-86
```
```
Y4753_PSEAE/3-86
```
```
Q9YD21_AERPE/1-86
```
```
YQEI_BACSU/2-85
```
```
Q8CSC0_STAEP/2-85
```
```
Q99TQ4_STAAM/2-85
```
```
Q8XIJ3_CLOPE/2-85
```
```
Q97JL3_CLOAB/1-84
```
```
Q88WT6_LACPL/4-87
```
```
Q9CIY2_LACLA/1-83
```
```
Q87WP6_PSESM/3-86
```
```
Q88DU9_PSEPK/28-111
```
```
Q87F65_XYLFT/5-88
```
```
Q8P9Y2_XANCP/5-88
```
```
Q8EHM4_SHEON/3-86
```
```
Q96YP2_SULTO/6-88
```
```
Q97WJ2_SULSO/1-84
```
```
Q8Y734_LISMO/2-85
```
```
Q8EPV0_OCEIH/2-85
```
```
Y1333_HAEIN/4-87
```
```
Q8ZBB4_YERPE/3-86
```
```
YHBY_ECOLI/3-86
```

Group 2

```
Q9LS51_ARATH/653-740
```
```
Q9SV62_ARATH/171-256
```
```
Q9LSV7_ARATH/848-932
```
```
Q9LT57_ARATH/92-176
```
```
Q9SU76_ARATH/605-692
```
```
Q9FYT6_MAIZE/564-651
```
```
Q9LF10_ARATH/570-657
```
```
Q8S2D7_ORYSA/172-256
```
```
Q9SK10_ARATH/164-248
```
```
O23307_ARATH/676-763
```
```
Q8L7C2_ARATH/579-666
```

Group 3

```
Q9LDA9_ARATH/203-286
```
```
Q8L7C2_ARATH/579-666
```
```
O65549_ARATH/159-244
```
```
Q9FFU1_ARATH/143-228
```
```
Q9SU76_ARATH/605-692
```
```
Q9LS51_ARATH/653-740
```
```
Q9LS85_ARATH/190-273
```
```
O23307_ARATH/676-763
```
```
Q9FYT6_MAIZE/564-651
```
```
Q9LF10_ARATH/570-657
```