SDPsite - PF01026

SDPsite: prediction of protein active and specific recognition sites from sequence and structure

Home & Submit job

Algorithm & 
Format requirements

Contact us

Gallery of examples

##FAMILY##

This family contains a protein with resolved 3D structure: Q9WZD5_THEMA/1-252, pdb ID: 1j6o. SDPsite predicts following important positions (numbering corresponds to 1j6o):

SDPs:

204P
CPs:

284H, 138P, 137H, 234G, 135G
Best cluster:

137H, 138P
Second best cluster:
Mapping predictions onto structure of 1j6o:

Associated grouping:

Group 1

```
Q8TZ65_METKA/10-282
```
```
Q97C01_THEVO/6-269
```
```
Q9HII5_THEAC/8-270
```
```
Q8ZVZ6_PYRAE/3-281
```
```
Q9YD98_AERPE/8-289
```
```
O29363_ARCFU/1-269
```
```
O58949_PYRHO/1-276
```
```
Y1127_METJA/7-275
```
```
Q8TI90_METAC/5-275
```
```
Q9HPJ3_HALN1/6-272
```

Group 2

```
Q8YZN7_ANASP/9-265
```
```
O27870_METTH/1-233
```
```
Y1383_METJA/1-253
```
```
Q9Z4Z2_STRCO/1-257
```
```
O69952_STRCO/1-256
```
```
Y761_METJA/1-250
```
```
Q8TXX6_METKA/1-255
```
```
O28509_ARCFU/1-247
```
```
Q8TYR0_METKA/1-250
```

Group 3

```
Q9JT74_NEIMA/26-283
```
```
O84599_CHLTR/1-261
```
```
Q9Z7B9_CHLPN/1-260
```
```
Q8Y0C5_RALSO/1-264
```
```
Q9KPL4_VIBCH/22-274
```
```
TATD2_HUMAN/495-760
```
```
Q9LF67_ARATH/1-290
```
```
Q9SRQ4_ARATH/1-262
```
```
YM8C_YEAST/1-307
```
```
SCN1_SCHPO/1-333
```
```
Q9PGX1_XYLFA/3-254
```
```
Q9HY53_PSEAE/1-223
```
```
Q9KVN8_VIBCH/1-252
```
```
Q8KBH6_CHLTE/4-257
```
```
Q9RY08_DEIRA/12-261
```
```
Q98Q33_MYCPU/184-434
```
```
Q98RJ4_MYCPU/1-251
```
```
Y017_UREPA/5-262
```
```
Q9U2N7_CAEEL/174-473
```
```
Q9U2Q7_CAEEL/139-433
```
```
Q8SW70_ENCCU/1-261
```
```
YJJV_HAEIN/1-261
```
```
Q9CM93_PASMU/1-262
```
```
Q8ZIQ6_YERPE/1-256
```
```
Q8NRY3_CORGL/17-273
```
```
P94121_ACIAM/1-242
```
```
Y1664_HAEIN/1-250
```
```
Q9DB58_MOUSE/3-187
```
```
Y009_MYCGE/1-261
```
```
Y009_MYCPN/1-260
```
```
O44160_CAEEL/4-284
```
```
Q95TA7_DROME/35-317
```
```
Q8Z3C1_SALTI/1-257
```
```
YJJV_ECOLI/2-257
```
```
Q8Z0U6_SALTI/5-256
```
```
Q8RDD0_THETN/1-251
```
```
O67843_AQUAE/1-250
```
```
Q9WZD5_THEMA/1-252
```
```
Q8R618_FUSNN/7-256
```
```
Q9CHP1_LACLA/1-254
```
```
Q8YAE5_LISMO/1-254
```
```
O83944_TREPA/1-254
```
```
O83959_TREPA/1-251
```
```
Y1786_SYNY3/1-256
```
```
Q8YWL2_ANASP/1-258
```
```
O08343_MYCTU/1-258
```
```
Q9RKD6_STRCO/23-295
```
```
Q96YX8_SULTO/1-241
```
```
Q981A2_SULSO/1-241
```
```
Q8U2H6_PYRFU/1-249
```
```
Q8TXW3_METKA/1-256
```
```
Q97J89_CLOAB/1-246
```
```
Q9HZY0_PSEAE/1-262
```
```
O13630_SCHPO/2-257
```
```
Q9V983_DROME/38-306
```
```
Q8XHG5_CLOPE/3-255
```
```
Q97EW7_CLOAB/1-252
```
```
O26093_HELPY/1-252
```
```
Q9PHM3_CAMJE/11-268
```
```
Q8P2P0_STRP8/19-272
```
```
Q97NM9_STRPN/1-253
```
```
YABD_BACSU/1-253
```
```
Q9HZN9_PSEAE/1-255
```
```
Q8XYH1_RALSO/1-263
```
```
Q9JV60_NEIMA/1-251
```
```
Q9A7A3_CAUCR/4-257
```
```
Q92GS7_RICCN/1-296
```
```
Q9ZCP1_RICPR/1-284
```
```
O58975_PYRHO/1-249
```
```
Q9UZT3_PYRAB/1-249
```
```
Y1582_METJA/4-246
```
```
Q8YA49_LISMO/4-241
```
```
Q8ZW27_PYRAE/1-233
```
```
Q9YF15_AERPE/7-250
```
```
Q973G5_SULTO/13-237
```
```
Q97ZA2_SULSO/1-226
```
```
Q8PQL0_XANAC/1-260
```
```
Q9PC68_XYLFA/1-260
```
```
Q96U49_NEUCR/14-471
```
```
YBF5_YEAST/36-417
```
```
Q8TD02_HUMAN/1-247
```
```
Q9SVC1_ARATH/22-288
```
```
Q99WB2_STAAM/1-254
```
```
Q9KGK7_BACHD/1-233
```
```
Q9KQI4_VIBCH/1-254
```
```
Q8YH18_BRUME/2-256
```
```
O26335_METTH/4-255
```
```
Q8THA4_METAC/3-251
```
```
Q8UKT0_AGRT5/1-241
```
```
Q9RZH8_DEIRA/1-241
```
```
Q98MV9_RHILO/1-254
```
```
YCFH_HAEIN/1-256
```
```
Q9CKE7_PASMU/1-256
```
```
Q92PX1_RHIME/1-254
```
```
Q8UFA3_AGRT5/1-255
```
```
Q8Z7J1_SALTI/1-255
```
```
Q8ZFT0_YERPE/1-255
```
```
Y355_BUCAI/1-263
```
```
Y343_BUCAP/1-261
```